nsol::Soma Class Reference

Class to represent the soma of neurons. More...

#include <Soma.h>

Inheritance diagram for nsol::Soma:

Collaboration diagram for nsol::Soma:

Public Member Functions
	Soma (void)
	Default constructor.
virtual	~Soma (void)
	Destructor.
Vec3f	center (void) const
	Method to get the center of the soma. More...
Nodes &	nodes (void)
	Method to get the container of nodes. More...
const float &	maxRadius (void) const
	Method to get the max radius of the soma. More...
const float &	minRadius (void) const
	Method to get the min radius of the soma. More...
const float &	meanRadius (void) const
	Method to get the mean radius of the soma. More...
void	center (const Vec3f &center_)
	Method to set the center of the soma. More...
void	addNode (NodePtr node)
	Method to add a node to the soma. More...
void	computeParams (void)
	Method to force the compute of the soma parameters (center and radii)
virtual const SomaStats *	stats (void) const
virtual SomaPtr	clone (void) const
bool	operator== (Soma &other)
bool	operator!= (Soma &other)

Protected Attributes
Vec3f	_center
	Center of the soma.
Nodes	_nodes
	Container of nodes of the soma.
float	_maxRadius
	Maximum radius of the soma.
float	_minRadius
	Minimum radius of the soma.
float	_meanRadius
	Mean radius of the soma.

Detailed Description

Class to represent the soma of neurons.

This class represents the soma and holds a container of the nodes that have been traced of its contour

Definition at line 38 of file Soma.h.

Member Function Documentation

void nsol::Soma::addNode

(

NodePtr

node

)

Method to add a node to the soma.

Parameters

node	pointer to the node to add

Referenced by nsol::AscReaderTemplated< ASC_READER_TEMPLATE_CLASSES >::_ReadSoma(), and nsol::SwcReaderTemplated< SWC_READER_TEMPLATE_CLASSES >::readMorphology().

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Vec3f nsol::Soma::center

(

void

)

const

Method to get the center of the soma.

Returns

center of the soma

Referenced by nsol::AscReaderTemplated< ASC_READER_TEMPLATE_CLASSES >::readMorphology(), and nsol::SwcReaderTemplated< SWC_READER_TEMPLATE_CLASSES >::readMorphology().

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void nsol::Soma::center

(

const Vec3f &

center_

)

Method to set the center of the soma.

Parameters

center_

New center of the soma

const float& nsol::Soma::maxRadius

(

void

)

const

Method to get the max radius of the soma.

Returns

max radius of the soma

const float& nsol::Soma::meanRadius

(

void

)

const

Method to get the mean radius of the soma.

Returns

mean radius of the soma

const float& nsol::Soma::minRadius

(

void

)

const

Method to get the min radius of the soma.

Returns

min radius of the soma

Nodes& nsol::Soma::nodes

(

void

)

Method to get the container of nodes.

Returns

container with all the nodes of the soma

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The documentation for this class was generated from the following file:

• Soma.h