nsol::DataSet Class Reference

Collaboration diagram for nsol::DataSet:

Public Member Functions
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadBlueConfigHierarchy (const std::string &, const std::string &)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadBlueConfigConnectivity ()
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadBlueConfigConnectivityWithMorphologies ()
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadMorphology (unsigned int)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadMorphologies (std::set< unsigned int > &)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadAllMorphologies (void)
void	unloadMorphologies (void)
void	close (void)
Columns &	columns (void)
const Columns &	columns (void) const
Circuit &	circuit (void)
const Circuit &	circuit (void) const
NeuronsMap &	neurons (void)
const NeuronsMap &	neurons (void) const
bool	addNeuron (const NeuronPtr neuron)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
NeuronPtr	loadNeuronFromFile (const std::string &file_, const unsigned int gid_, const unsigned int layer_=0, const Matrix4_4f transform_=Matrix4_4fIdentity, const Neuron::TMorphologicalType type_=Neuron::PYRAMIDAL)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadCorticalNeuronFromFile (const std::string &file_, const unsigned int gid_, const unsigned int columnId_=0, const unsigned int miniColumnId_=0, const unsigned int layer_=0, const Matrix4_4f transform_=Matrix4_4fIdentity, const Neuron::TMorphologicalType type_=Neuron::PYRAMIDAL)
template<class NODE = Node, class NEURONMORPHOLOGYSECTION = NeuronMorphologySection, class DENDRITE = Dendrite, class AXON = Axon, class SOMA = Soma, class NEURONMORPHOLOGY = NeuronMorphology, class NEURON = Neuron, class MINICOLUMN = MiniColumn, class COLUMN = Column>
void	loadXmlScene (const std::string &xmlSceneFile)
void	writeXmlScene (const std::string &xmlSceneFile)

Protected Member Functions
Vec3f	_calculatePosition (const Vec3fs &sectionNodes, unsigned int segmentID, float distance) const

Protected Attributes
Columns	_columns
	Entry for cortical hierarchy in form o a container of cortial columns.
Circuit	_circuit
	Entry for connections of the circuit.
NeuronsMap	_neurons
	Container of neurons by its gid.
std::map< std::string, NeuronMorphologyPtr >	_morphologies
	Map of the paths of morphologies.

Detailed Description

Definition at line 50 of file DataSet.h.

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The documentation for this class was generated from the following file:

• DataSet.h